Haja Kadarmideen

Haja Kadarmideen

Head of Department, Professor

DTU BIOINFORMATICS
Department of Bio and Health Informatics

Administration
DTU Bioinformatics Employees
Quantitative and Systems Genomics

Technical University of Denmark

Kemitorvet

Building 208, room 007

2800 Kgs. Lyngby

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2017
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Single nucleotide polymorphism discovery in bovine liver using RNA-seq technology

Pareek, Chandra Shekhar ; Błaszczyk, Paweł ; Dziuba, Piotr ; Czarnik, Urszula ; Fraser, Leyland ; Sobiech, Przemysław ; Pierzchała, Mariusz ; Feng, Yaping ; Kadarmideen, Haja ; Kumar, Dibyendu
in journal: P L o S One (ISSN: 1932-6203) (DOI: http://dx.doi.org/10.1371/journal.pone.0172687), vol: 12, issue: 2, 2017

Type: Journal article (Peer reviewed)

Status: Published     |    Year: 2017     |    DOI: http://dx.doi.org/10.1371/journal.pone.0172687

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RNA-Seq transcriptomics and pathway analyses reveal potential regulatory genes and molecular mechanisms in high- and low-residual feed intake in Nordic dairy cattle

Salleh, M. S. ; Mazzoni, G. ; Höglund, J. K. ; Olijhoek, D. W. ; Lund, P. ; Løvendahl, P. ; Kadarmideen, Haja
in journal: B M C Genomics (ISSN: 1471-2164) (DOI: http://dx.doi.org/10.1186/s12864-017-3622-9), vol: 18, issue: 1, 2017

Type: Journal article (Peer reviewed)

Status: Published     |    Year: 2017     |    DOI: http://dx.doi.org/10.1186/s12864-017-3622-9

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Identification of potential biomarkers in donor cows for in vitro embryo production by granulosa cell transcriptomics

Mazzoni, Gianluca ; Salleh, Suraya M ; Freude, Kristine ; Pedersen, Hanne S. ; Stroebech, Lotte ; Callesen, Henrik ; Hyttel, Poul ; Kadarmideen, Haja ; Óvilo, Cristina (Editor)
in journal: P L o S One (ISSN: 1932-6203) (DOI: http://dx.doi.org/10.1371/journal.pone.0175464), vol: 12, issue: 4, 2017

Type: Journal article (Peer reviewed)

Status: Published     |    Year: 2017     |    DOI: http://dx.doi.org/10.1371/journal.pone.0175464

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A genome-wide association study of thyroid stimulating hormone and free thyroxine in Danish children and adolescents

Nielsen, Tenna Ruest Haarmark ; Appel, Emil Vincent Rosenbaum ; Svendstrup, Mathilde ; Ohrt, Johanne Dam ; Dahl, Maria ; Fonvig, Cilius Esmann ; Hollensted, Mette ; Have, Christian Theil ; Kadarmideen, Haja ; Pedersen, Oluf ; Hansen, Torben ; Holm, Jens-Christian ; Grarup, Niels ; Meyre, David (Editor)
in journal: P L o S One (ISSN: 1932-6203) (DOI: http://dx.doi.org/10.1371/journal.pone.0174204), vol: 12, issue: 3, 2017

Type: Journal article (Peer reviewed)

Status: Published     |    Year: 2017     |    DOI: http://dx.doi.org/10.1371/journal.pone.0174204

 

In vitro production of bovine embryos: cumulus/granulosa cell gene expression patterns point to early atresia as beneficial for oocyte competence

Mazzoni, Gianluca ; Razza, Eduardo ; Pedersen, Hanne S. ; Secher, Jan ; Kadarmideen, Haja ; Callesen, Henrik ; Stroebech, Lotte ; Freude, Kristine ; Hyttel, Poul
part of: Proceedings of the 31th Annual Meeting of the Brazilian Embryo Technology Society (SBTE), pages: 482-489, 2017,
Presented at:
31st Annual Meeting of the Brazilian Embryo Technology Society, 2017

Type: Article in proceedings (Peer reviewed)

Status: Published     |    Year: 2017     |    DOI: http://dx.doi.org/10.21451/1984-3143-AR990

 

Application of integrative genomics and systems biology to conventional and in vitro reproductive traits in cattle

Mazzoni, Gianluca ; Pedersen, Hanne S. ; de Oliveira Junior, Gerson A. ; Alexandre, Pamela ; Razza, Eduardo M. ; Callesen, Henrik ; Hyttel, Poul ; Nogueira, Marcelo F. G. ; Ferraz, Jose Bento S. ; Kadarmideen, Haja
part of: Proceedings of the 31st Annual Meeting of the Brazilian Embryo Technology Society (SBTE), pages: 507-513, 2017,
Presented at:
31st Annual Meeting of the Brazilian Embryo Technology Society, 2017

Type: Article in proceedings (Peer reviewed)

Status: Published     |    Year: 2017     |    DOI: http://dx.doi.org/10.21451/1984-3143-AR993

 

Basic and practical aspects of pregnancy establishment in cattle

Pedersen, Hanne Skovsgaard ; Mazzoni, Gianluca ; Stroebech, Lotte ; Kadarmideen, Haja ; Hyttel, Poul ; Callesen, Henrik
part of: Proceedings of the 31st Annual Meeting of the Brazilian Embryo Technology Society (SBTE);, pages: 581-588, 2017,
Presented at:
31st Annual Meeting of the Brazilian Embryo Technology Society, 2017

Type: Article in proceedings (Peer reviewed)

Status: Published     |    Year: 2017     |    DOI: http://dx.doi.org/10.21451/1984-3143-AR1001

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Differential expression and co-expression gene networks reveal candidate biomarkers of boar taint in non-castrated pigs

Drag, Markus ; Skinkyté-Juskiené, Ruta ; Do, Duy N. ; Kogelman, Lisette J. A. ; Kadarmideen, Haja
in journal: Scientific Reports (ISSN: 2045-2322) (DOI: http://dx.doi.org/10.1038/s41598-017-11928-0), vol: 7, issue: 1, 2017

Type: Journal article (Peer reviewed)

Status: Published     |    Year: 2017     |    DOI: http://dx.doi.org/10.1038/s41598-017-11928-0


http://www.bioinformatics.dtu.dk/english/service/phonebook/person?id=123085&tab=2&qt=dtupublicationquery
22 NOVEMBER 2017